Synthesis Development and Molecular Docking Study of New Azo Chalcone Derivatives

Keywords: Azo Chalcone Compounds, Synthesis, Antiviral Activity, SARS-CoV-2, Molecular Docking

Abstract

This work is divided into two main parts. The first part involves the synthesis of new azo chalcone compounds through a two-step process. Initially, azo compounds are synthesized by diazotizing 3-nitroaniline, followed by a coupling reaction with 4-hydroxyacetophenone, which has a terminal ketone group. Subsequently, the resulting product undergoes a Claisen–Schmidt condensation reaction with various aromatic aldehyde substrates to produce new α, β-unsaturated ketones, known as azo chalcone compounds. The successful synthesis of these compounds is confirmed using Fourier-transform infrared spectroscopy, ¹HNMR, and ¹³C NMR spectral analyses. The second part of this study explores the theoretical biological activity of the synthesized compounds against severe acute respiratory syndrome coronavirus 2 through molecular docking studies. The results indicate potential antiviral properties for each compound, with compounds B5 and B8 exhibiting the most promising results. These compounds achieved higher docking scores (ΔG −6.235 kcal/mol and −5.832 kcal/mol, respectively) and each formed four hydrogen bonds with the target protein.

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Author Biographies

Myasar Kh. Ibrahim, Department of Basic Science, College of Agricultural Engineering Sciences, University of Duhok, Duhok, Kurdistan Region – F.R. Iraq

Myasar Kh. Ibrahim is a Lecturer at the Department of Basic Science, College of Agricultural Engineering Sciences, University of Duhok. He got the B.Sc. degree in Chemistry Science, the M.Sc. degree in Organic chemistry. His research interests are in Organic synthesis, Solvatochromism and instrumental analysis. Myasar is a member of Kurdistan Chemists Syndicate.

Shireen R. Mohammed, Department of Chemistry, College of Science, University of Zakho, Duhok, Kurdistan Region – F.R. Iraq

Shireen R. Mohammed is a Professor at the Department of Chemistry, College of Science, University of Zakho. She got the B.Sc. degree in Chemistry Science, the M.Sc. degree in organic chemistry and the Ph.D. degree in organic chemistry. Her research interests are in organic synthesis, heterocyclic and organometallic. Dr. Shireen is a member of the editorial board of American Journal of Heterocyclic Chemistry, SCIREA Journal of Chemistry and Oriental Journal of Chemistry.

References

Abbas, S., Al-Hamdani, A.L.I., and Shaker, S.A., 2011. Synthesis, characterization, structural studies and biological activity of a new schiff base-Azo ligand and its complexation with selected metal ions. Oriental Journal of Chemistry, 27(3), pp.835-845.

Ahmad, B., Batool, M., Ul Ain, Q., Kim, M.S., and Choi, S., 2021. Exploring the binding mechanism of PF-07321332 SARS-CoV-2 protease inhibitor through molecular dynamics and binding free energy simulations. International Journal of Molecular Sciences, 22(17), p.9124. DOI: https://doi.org/10.3390/ijms22179124

Aksöz, B.E., and Ertan, R., 2012. Spectral properties of chalcones II. Fabad Journal of Pharmaceutical Sciences, 37(4), pp.205-216.

ALKazmi, A.A., Hawais, F.E., and Alasadi, Y.K., 2023. Synthesis and characterization of some pyrazoline derivatives from Chalcones containing azo and ether groups. Tikrit Journal of Pure Science, 22(9), pp.69-75. DOI: https://doi.org/10.25130/tjps.v22i9.877

Baper, S.H., and Mohammd, M.S., 2023. Synthesis, characterization and study anticancer activity of new Azo-Chalcone with mix Ligand of some divalent metal chelate complexes. Journal of Kufa for Chemical Sciences, 2(9), pp.390-408. DOI: https://doi.org/10.36329/jkcm/2022/v2.i9.13312

Benkhaya, S., M’rabet, S., and El Harfi, A., 2020. Classifications, properties, recent synthesis and applications of azo dyes. Heliyon, 6(1), p.e03271. DOI: https://doi.org/10.1016/j.heliyon.2020.e03271

Botros, R., and CreeK, B., 1977. Azomethine dyes derived from an OHydroxy aromaticaldehyde and A 2-Amnopyrone’, United State Patent 405119A. Available from: https://patentimages.storage.googleapis.com/aa/21/3e/16ceb20dd9212f/US4051119.pdf.

Calvino, V., Picallo, M., López-Peinado, A.J., Martín-Aranda, R.M., and Durán-Valle, 2005. Ultrasound accelerated Claisen-Schmidt condensation: A green route to chalcones. Applied Surface Science, 252(17), pp.6071-6074. DOI: https://doi.org/10.1016/j.apsusc.2005.11.006

Chawsheen, M.A., and Al-Bustany, H.A., 2019. Docking study to predict the efficacy of phosphatidylinositol 3-kinase α inhibitors. Aro-The Scientific Journal of Koya University, 7(2), pp.47-52. DOI: https://doi.org/10.14500/aro.10565

Clayden, J., Greeves, N., and Warren, S., 1995. Organic Chemistry. 2nd ed. Oxford University Press Inc., New York.

Elkanzi, N.A.A., Hrichi, H., Alolayan, R.A., Derafa, W., Zahou, F.M., and Bakr, R.B., 2022. Synthesis of chalcones derivatives and their biological activities: A review. ACS Omega, 7(32), pp.27769-27786. DOI: https://doi.org/10.1021/acsomega.2c01779

Gür, M., 2019. Synthesis, characterization, and antimicrobial properties of new 1,3,4-thiadiazoles derived from azo dyes. Journal of Heterocyclic Chemistry, 56(3), pp.980-987. DOI: https://doi.org/10.1002/jhet.3480

Hawaiz, F.E., and Samad, M.K., 2012. Synthesis and spectroscopic characterization of some new biological active azo pyrazoline derivatives. European Journal of Chemistry, 9(3), pp.1613-1622. DOI: https://doi.org/10.1155/2012/525940

Hawaiz, F.E., Hussein, A.J., and Samad, M.K., 2014. One‐pot three component synthesis of some new azo‐pyrazoline derivatives. European Journal of Chemistry, 5, pp.233-236. DOI: https://doi.org/10.5155/eurjchem.5.2.233-236.979

Hawaiz, F.E., Samad, M.K., and Aziz, M.Y., 2015. Synthesis of some new heterocyclic compounds derived from 4-(4-hydroxy-3-chlorophenyl) azoaceto phenone. Journal of Zankoy Sulaimani-Part A, 17(2), pp.85-92. DOI: https://doi.org/10.17656/jzs.10383

Hsieh, C.T., Hsieh, T.J., El-Shazly, M., Chuang, D.W., Tsai, Y.H., Yen, C.T., Wu, S.F., Wu, Y.C., and Chang, F.R., 2012. Synthesis of chalcone derivatives as potential anti-diabetic agents. Bioorganic and Medicinal Chemistry Letters, 22(12), pp.3912-3915. DOI: https://doi.org/10.1016/j.bmcl.2012.04.108

Hussein, A.J., and Aziz, H.J., 2011. Synthesis and spectroscopic characterization of some new azo-thiazolidinone derivatives. Pelagia Research Library, 2(5), pp.136-146.

Kadhium, A.J., Mohammed, M.S., and Baper, S.H., 2023. Design, preparation some transition metal complexes of Chalcone-Azo with Paracetamol ligand and Evaluation anti-biological activity of some complexes. Journal of Kufa for Chemical Sciences, 3(1), pp.55-67. DOI: https://doi.org/10.36329/jkcm/2023/v3.i1.13523

Kaka, K.N., Dabbagh, A.M., and Hamad, W.M., 2016. Kinetics study of the formation of pyrmidine thione from the reaction of 2,6-dibenzylidinecyclohexanone and its derivatives with thiourea. ARO-The Scientific Journal of Koya University, 4(2), pp.37-42. DOI: https://doi.org/10.14500/aro.10142

Katritzky, A.R., Chen, Q.Y., and Tala, S.R., 2009. Convenient and efficient preparations of azodye-labeled peptides. Chemical Biology and Drug Design, 73(6), pp.611-617. DOI: https://doi.org/10.1111/j.1747-0285.2009.00813.x

Kofie, W., Dzidzoramengor, C., and Adosraku, R.K., 2015. Synthesis and evaluation of antimicrobial properties of AZO dyes. International Journal of Pharmacy and Pharmaceutical Sciences, 7(4), pp.398-401.

Kozlowski, M.R., and Watson, A., 1992. Inhibition of gp120 binding to the CD4 antigen by dyes: Mechanism of effect and contribution to anti-HIV activity. Antiviral Chemistry and Chemotherapy, 3(1), pp.49-53. DOI: https://doi.org/10.1177/095632029200300107

Mamand, S.O., Abdul, D.A., Ayoob, M.A., Hussein, A.J., Samad, M.K., and Hawaiz, F.E., 2024. Traditional, one-pot three-component synthesis and anti bacterial evaluations of some new pyrimidine derivatives. Inorganic Chemistry Communications, 160, p.111875. DOI: https://doi.org/10.1016/j.inoche.2023.111875

Mezgebe, K., and Mulugeta, E., 2022. Synthesis and pharmacological activities of azo dye derivatives incorporating heterocyclic scaffolds: A review. RSC Advances, 12(40), pp.25932-25946. DOI: https://doi.org/10.1039/D2RA04934A

Mohamed, G.G., Mahmoud, W.H., and Refaat, A.M., 2020. Nano-azo ligand and its superhydrophobic complexes: Synthesis, characterization, DFT, contact angle, molecular docking, and antimicrobial studies. Journal of Chemistry, 2020, pp. 19. DOI: https://doi.org/10.1155/2020/6382037

Okolo, E.N., Ugwu, D.I., Ezema, B.E., Ndefo, J.C., Eze, F.U., Ezema, C.G., Ezugwu, J.A., and Ujam, O.T., 2021. New chalcone derivatives as potential antimicrobial and antioxidant agent. Scientific Reports, 11(1), pp.1-13. DOI: https://doi.org/10.1038/s41598-021-01292-5

Pretsch, E., Bühlmann, P., and Badertscher, M., 2000. Structure Determination of Organic Compounds: Table s of Spectral Data. Springer, Berlin. DOI: https://doi.org/10.1007/978-3-662-04201-4

Rohini, R.M., Devi, K., and Devi, S., 2015. Synthesis of novel phenyl azo chalcone derivatives for antitubercular, antiinflammatory and antioxidant activity. Der Pharma Chemica, 7(1), pp.77-83.

Shriner, R.L., Hermann, C.K.F., Morrill, T.C., Curtin, D.Y., and Fuson, R.C., 2004. The Systematic Identification of Organic Compounds. John Wiley & Sons. Inc., United States.

Sivasankerreddy, L., Nagamani, B., Rajkumar, T., Babu, M.S., Subbaiah, N.Y., Harika, M.S., and Nageswarao, R., 2018. Novel diazenyl containing phenyl styryl ketone derivatives as antimicrobial agents. Anti-Infective Agents, 17(1), pp.28-38. DOI: https://doi.org/10.2174/2211352516666180927111546

Tawfiq, M.T., 2016. Synthesis and characterization of some new azo dyes derivatives via chalcone and study some of their biological activity. Baghdad Science Journal, 13(1), p.0122. DOI: https://doi.org/10.21123/bsj.2016.13.1.0122

Vollheim, T., 1993. Survey of industrial chemistry. Advanced Materials, 5(5), p.400. DOI: https://doi.org/10.1002/adma.19930050520

Yates, E., and Yates, A., 2016. Johann Peter Griess FRS (1829-88): Victorian brewer and synthetic dye chemist. Notes and Records, 70(1), pp.65-81. DOI: https://doi.org/10.1098/rsnr.2015.0020

Zweifel, G.S., Nantz, M.H., and Somfai, P., 2017. Modern Organic Synthesis: An Introduction, Modern Organic Synthesis. John Wiley & Sons, United States.

Published
2024-08-18
How to Cite
Ibrahim, M. K. and Mohammed, S. R. (2024) “Synthesis Development and Molecular Docking Study of New Azo Chalcone Derivatives”, ARO-THE SCIENTIFIC JOURNAL OF KOYA UNIVERSITY, 12(2), pp. 70-78. doi: 10.14500/aro.11522.